BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021F12SP1|AL427800
(1022 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1609 1896 0.0
3x_Contig1551 366 e-101
>3x_Contig1609
Length = 15966
Score = 1896 bits (952), Expect = 0.0
Identities = 978/988 (98%), Gaps = 2/988 (0%)
Strand = Plus / Minus
Query: 36 cttttttcccctaataatggatcagcaaagctaatcaatggtcaattgctgggattcaga 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7293 cttttttcccctaataatggatcagcaaagctaatcaatggtcaattgctgggattcaga 7234
Query: 96 gaaaattttacgaataccgccaggcgtggaacgaacatgctaaaccagataaattactgc 155
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 7233 gaaaattttacgaataccgccaggcg-ggaacgaacatgctaaaccagataaattactgc 7175
Query: 156 acgaataactaaaactaatcggctcacaaggcctgtgtaaatatacactcgagcccatct 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7174 acgaataactaaaactaatcggctcacaaggcctgtgtaaatatacactcgagcccatct 7115
Query: 216 tttcaagcgtagaacacaattcccgacaaatactttatttccgaagctttcccatccaaa 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7114 tttcaagcgtagaacacaattcccgacaaatactttatttccgaagctttcccatccaaa 7055
Query: 276 aattcctttacttgaaggaagaaaaggcgaaactgacatgttgacataatcttattaagg 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7054 aattcctttacttgaaggaagaaaaggcgaaactgacatgttgacataatcttattaagg 6995
Query: 336 aagcgatcctgaacgtaatggagattaaggaacaacatgcggctgctatgttctgagcgg 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6994 aagcgatcctgaacgtaatggagattaaggaacaacatgcggctgctatgttctgagcgg 6935
Query: 396 taatttgacacataacagtattgttgggtgcaatcgacaaaccaagttatttcctacacc 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6934 taatttgacacataacagtattgttgggtgcaatcgacaaaccaagttatttcctacacc 6875
Query: 456 ccggtcttctaaacgatccatgtttctgtattaatatgattcacttattgagcttagaca 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6874 ccggtcttctaaacgatccatgtttctgtattaatatgattcacttattgagcttagaca 6815
Query: 516 gatgtaagamtctcattactatgtgatatgaagctcagcagcattgaagttgccaatcca 575
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6814 gatgtaagaatctcattactatgtgatatgaagctcagcagcattgaagttgccaatcca 6755
Query: 576 cataccgtagcaacttttaggcagtctgtmacaaaamagaaaaataagttgggttacaac 635
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 6754 cataccgtagcaacttttaggcagtctgtaacaaaaaagaaaaataagttgggttacaac 6695
Query: 636 aaaggccctcgatctgacattcataacagttgamaatgtctgatttagagaaggaacctt 695
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 6694 aaaggccctcgatctgacattcataacagttgaaaatgtctgatttagagaaggaacctt 6635
Query: 696 cagtgacggagaaaacaatctcgagattccagacggtggatacggatgggttatcacatt 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6634 cagtgacggagaaaacaatctcgagattccagacggtggatacggatgggttatcacatt 6575
Query: 756 tgcattctttttgtacaatttttgtacctggggtgcaaatgctggttacgctgtatacct 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6574 tgcattctttttgtacaatttttgtacctggggtgcaaatgctggttacgctgtatacct 6515
Query: 816 tgctacatatttgtcccgtgatgtc-ttyctggcggaggcaagctagattatgctgctat 874
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 6514 tgctacatatttgtcccgtgatgtctttcctggcggaggcaagctagattatgctgctat 6455
Query: 875 tggtggtttagcatttggagtaggattattatttgcgccggtgattatatatttctctag 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6454 tggtggtttagcatttggagtaggattattatttgcgccggtgattatatatttctctag 6395
Query: 935 aaattatggagttcatgttgtcattggactgggtataatttgccaatgcgccgctttatt 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6394 aaattatggagttcatgttgtcattggactgggtataatttgccaatgcgccgctttatt 6335
Query: 995 attagctgsattttcaaggaagttgtgg 1022
|||||||| |||||| | ||||||||||
Sbjct: 6334 attagctgcattttccaagaagttgtgg 6307
>3x_Contig1551
Length = 9073
Score = 366 bits (184), Expect = e-101
Identities = 267/292 (91%), Gaps = 2/292 (0%)
Strand = Plus / Minus
Query: 36 cttttttcccctaataatggatcagcaaagctaatcaatggtcaattgctgggattcaga 95
||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 614 cttttttcccctaataatgaatcagcaaagctaatcaatggtcaattgctgggaatcaga 555
Query: 96 gaaaattttacgaataccgccaggcgtggaacgaacatgctaaaccagataaattactgc 155
||||| |||||||||||||||||||| ||||| ||| |||||||||||||||| |||||
Sbjct: 554 gaaaactttacgaataccgccaggcg-ggaacaaacctgctaaaccagataaactactgt 496
Query: 156 acgaataactaaaactaatcggctcacaaggcctgtgtaaatatacactcgagcccatct 215
||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 495 acgaataactaaaaccaaccggctcacaagacctgtgtaaatatacactcgagcccatct 436
Query: 216 tttcaagcgtagaacacaattcccgacaaatactttatttccgaagctttcccatccaaa 275
|||| |||||||||| ||||||||||||| |||||||||||||||||| | || |||
Sbjct: 435 tttctggcgtagaacatcattcccgacaaatgttttatttccgaagctttctcttcgaaa 376
Query: 276 aattcc-tttacttgaaggaagaaaaggcgaaactgacatgttgacataatc 326
||| || ||| |||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 375 aatcccatttgcttgaaagaagaaaagacgaaactgacatgttgacataatc 324
Score = 207 bits (104), Expect = 3e-53
Identities = 235/277 (84%), Gaps = 4/277 (1%)
Strand = Plus / Minus
Query: 365 gaacaacatgcggctgctatgttctgagcggtaatttgacacataacagtattgt--tgg 422
||||||||| |||| |||||||||| |||||||||||||||||||| || |||| |||
Sbjct: 276 gaacaacatacggccgctatgttctcagcggtaatttgacacataatagacttgtgttgg 217
Query: 423 gtgcaatcgacaaaccaagttatttcctacaccccggtcttctaaacgatccatgtttct 482
||||||||||||||||| ||||||| |||||||| |||| ||| ||||||| ||||
Sbjct: 216 gtgcaatcgacaaaccagtatatttccgacaccccgatctttcaaaggatccatacttct 157
Query: 483 gtattaatatgattcacttattgagcttagacagatgtaa-gamtctcattactatgtga 541
||| ||||||||||||| ||||||||||||| | |||| || || || || ||||||
Sbjct: 156 atataaatatgattcactcattgagcttagacgaaagtaatgaatcccaacacgatgtga 97
Query: 542 tatgaagctcagcagcattgaagttgccaatccacataccgtagcaacttttaggcagtc 601
||||| |||||||||| ||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 96 catgaa-ctcagcagcacagaagttgtcaatccacataccatagcaacttttaggcagtc 38
Query: 602 tgtmacaaaamagaaaaataagttgggttacaacaaa 638
||| ||| || ||| |||||||||| |||||| ||||
Sbjct: 37 tgtaacagaaaagacaaataagttgagttacagcaaa 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6147
Number of Sequences: 1807
Number of extensions: 6147
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 2
length of query: 1022
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1006
effective length of database: 10,329,639
effective search space: 10391616834
effective search space used: 10391616834
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)